The Hidden Gut-Brain Patterns That Influence Energy, Mood, and Motivation
Written by Dr. Malisa Carullo, MSc, ND
When you have a strong foundation, your gut is the engine that keeps you moving.
Modern science has revealed a powerful, yet hidden, gut-brain connection that influences your energy, motivation, and emotional balance.
The connection between gut health and motivation is deeper than most people believe. The gut is filled with microbes that influence neurotransmitters such as serotonin and dopamine, which regulate our focus, drive, and emotional balance.
When our digestive system’s balance is disrupted, the gut health and energy levels drop, and you may find it hard to accomplish simple tasks.
In this article, we’ll explore how your gut and brain communicate, and the subtle patterns that control your energy, mood, and motivation.
Table of Contents
The Sequel to Your Foundational Health Reset
In the first part of this series, we talked about something that almost no one considers when setting their January goals: How to build healthy habits that actually stick. And those who try to build these habits do so while ignoring the foundational health basics. This is like trying to build a house without laying a foundation.
We explored how nutrients, sleep rhythm, stress recovery, hydration, and basic routines form the base layer that supports energy, mood, motivation, and long-term consistency.1-3
Once that foundation is laid, most people start to feel a subtle shift, like the “engine” of their body is finally turning over again. Energy feels smoother. Mood feels steadier. Tasks feel lighter. Habits don’t require quite as much willpower.4
Now it’s time for the next step, the layer that determines whether your new routine becomes sustainable or fizzles out: Your digestive system.
If foundational health is the soil…your gut health is the root system. Without strong roots, even the healthiest soil can’t support new growth. And without a well-functioning gut, even the best habits don’t feel easy or natural the way we want them to.
This article explores why gut health should be your next focus. It also shows you how a simple, structured, evidence-based gut reset can help your body, mind, and habits stay strong all year long.
5 Reasons Why Gut Health and Motivation Go Hand In Hand
Once foundational nutrients are restored, through whole foods, hydration, vitamins, probiotics, and routine, you create enough biological “bandwidth” to address deeper systems.5
This is where many people go wrong.
They take supplements, eat a little cleaner, move their body, and expect everything to fall into place immediately. Many patients come to me saying, “I’m doing everything right, but I still don’t feel better.” The very first place I look is their gut. Because if the gut is inflamed, sluggish, or imbalanced, motivation eventually drops, even if you’re doing all the things.6
Here’s why balancing your gut becomes the necessary second step:
1. The Gut Determines How Well You Absorb Nutrients
You can consume every vitamin, mineral, and nutrient-rich food available. But if your gut lining is inflamed or your digestion is slow, your ability to absorb those nutrients becomes significantly compromised.7,8
When absorption weakens, you naturally experience less energy, reduced nutrient delivery to your cells, diminished mental clarity, and slower progress with your health goals.
2. The Gut Directly Controls Mood and Motivation
Recent studies have established that there is a direct link between gut health and motivation. Your gut and brain communicate constantly through a powerful pathway known as the gut–brain axis.9,10
When your gut is not functioning well, it directly affects how you feel emotionally and mentally. Mood often becomes unstable, sleep quality decreases, cravings become stronger, stress tolerance drops, and motivation naturally declines.11
This is why a targeted gut reset can feel like someone has turned the lights back on inside your mind. A well-supported gut restores balance in the very system that influences your emotional resilience and clarity.
3. The Gut Influences Cravings, Blood Sugar, and Willpower
Cravings for sweet, salty, or fatty foods have almost nothing to do with discipline. Your microbiome literally sends chemical signals that influence the types of foods you crave and the choices you make throughout the day.12,13
When your gut is healthy and balanced, it communicates signals of satiety, stability, and control, making it easier to choose nourishing foods and reject those guilty pleasures.
However, when the gut is imbalanced, it sends mixed or misleading messages that can intensify cravings and make healthy habits feel far more difficult to maintain than they should. 14
4. Your Gut Sets the Tone for Detoxification
Your liver, lymphatic system, immune system, and detoxification pathways all depend on your gut functioning smoothly.
When digestion slows down, your detox processes naturally slow down as well. This can influence everything from your skin health and hormone balance to your daily energy levels, inflammation, and mental clarity.
By supporting your gut first, detoxification becomes a gentle, effective process rather than something overwhelming or extreme.
5. A Healthy Gut Makes Habits Feel Effortless
This is the part most people tend to underestimate. When the gut is functioning well, it becomes noticeably easier to choose healthier meals, maintain steady energy throughout the day, think clearly, sleep more soundly, and experience fewer cravings.
Even recovery after workouts improves, and long-term consistency feels far more achievable. Gut health may not be the only pillar of wellness, but it is the one that holds all the other pieces together.
The Gut–Body–Mind Sequence: Why This Order Works
The Gut–Body–Mind sequence follows the natural order in which your physiology responds and adapts.
First comes the foundational health habits. Here, you restore essential nutrients, stabilize your sleep rhythms, hydrate properly, and strengthen your basic metabolic and emotional baseline.
Once this groundwork is in place, the next phase is a gut reset. This is where the link between gut health and motivation becomes especially clear. By reducing inflammation, rebalancing the microbiome, and supporting detoxification pathways, the gut reset helps naturally shift cravings, energy, and emotional resilience.
Only then do long-term habits become truly sustainable. Your body now has the biological environment needed to support consistent routines rather than relying on short-lived January motivation.
Most people skip straight to the habit-building stage and then wonder why they feel stuck or burned out by February. When you follow the proper order, you’re no longer fighting your physiology; you’re working with it.
Metabolic Detox vs. Gut Reset
Once your foundational nutrients are in place and your energy and routines begin to stabilize, most people naturally reach a crossroads:
Should I start with a metabolic detox or focus more specifically on gut balance? Both are incredibly effective next steps, but they serve slightly different purposes. Understanding how they work can help you choose the path that aligns best with your body’s needs and your goals for the new year.
Option 1: The 10-Day Metabolic Detox for Gut Health and Energy Level Boost (Clear Change Program)
Best for full-body reset, clearer energy, and reduced inflammation.
The 10-Day Clear Change Program is a comprehensive metabolic reboot that supports the entire detoxification network—liver, gut, kidneys, lymphatic system, and even the brain.
This is not a cleanse, a fast, or a restrictive juice diet. Instead, it is a nutrient-rich metabolic protocol designed to help your organs eliminate accumulated toxins and inflammatory byproducts safely and efficiently.
The heart of the program is UltraClear Renew, a medical food containing amino acids, antioxidants, and targeted nutrients that support both Phase I and Phase II liver detoxification.
This ensures that detox intermediates are neutralized instead of building up and making you feel worse. The program also includes Advaclear, a formula that keeps detox phases balanced. With it, you don’t experience the headaches, fatigue, or irritability that often accompany traditional cleanses.
People who choose this option typically want:
- increased energy
- clearer skin
- reduced bloating
- better inflammation balance
- improved mental clarity
- less reactivity to foods
- smoother digestion
- a true “starting fresh” feeling
This approach is perfect for those who feel puffy, sluggish, or weighed down, especially after stressful seasons, travel, or periods of inconsistent eating. It offers a clean slate for the whole body.
Option 2: The Gut Health Bundle (Candibactin BR + UltraFlora Balance Probiotic)
Best for targeted gut support, less bloating, and microbiome balance.
The Gut Health Bundle focuses specifically on balancing the gut microbiome and relieving digestive symptoms by clearing, reseeding, and restoring your gut.
Candibactin BR helps clear the gut environment by supporting microbial balance and reducing overgrowth of unwanted microbes, to relieve bloating, heaviness, and digestive discomfort.
Once the unwanted microbes have been cleared out, UltraFlora Balance replenishes your gut with good bacteria that support regularity, immune function, mood, and overall gut-brain communication.
People who choose this option are often dealing with:
- Bloating
- Irregular digestion
- Chronic cravings
- Gas or discomfort after meals
- Sluggish digestion
- Symptoms post-antibiotic use
- Brain fog linked to gut imbalance
This bundle is ideal for those who know their gut needs attention before anything else. It’s also the better starting point for people who feel overly reactive to foods, sensitive to supplements, or overwhelmed by detox protocols.
In many cases, a gut reset is exactly what makes detox more comfortable and effective later on.
Both programs create a reset, but they do it through different mechanisms. Some people even do both. They start with the Gut Health Bundle as a gentle primer, then move into the 10-Day Clear Change Detox once their gut is more balanced. This sequence minimizes discomfort and often leads to the best long-term results.
Gut Bundle vs. Metabolic Detox: Which One Should You Start With?
Focusing on your gut health ensures an optimal environment that supports your body’s crucial functions. Your gut is one of the body’s core elimination organs, and keeping it healthy supports liver detoxification and efficient removal of waste. If your gut is leaky, it will hinder your body’s natural detox pathways and circulate waste through your body.⁷˒⁸
This disruption can also weaken the gut-motivation connection, making energy and follow-through harder to sustain. Starting with the Gut Bundle is perfect for improved nutrient absorption. It includes prebiotics and probiotics to balance gut bacteria and digestive enzymes for food breakdown.
Optimized food absorption ensures proper utilization of nutrients provided in a metabolic detox program, which typically contains comprehensive mineral and vitamin blends.
The metabolic detox is ideal for whole-body refresh, sluggishness, and inflammation. While the order of the gut bundle and metabolic detox isn’t strict, addressing gut health first is essential. The gut bundle prevents toxins from the gut from being reabsorbed into the bloodstream and overwhelming the liver. Besides, the combination path is ideal for a gentler progression.
How a Gut Reset Supports Daily Life and Sustainable Habits
A gut reset serves as a transition to more sustainable lifestyle choices. Here are just some of the possible benefits you can experience from a reset to your gut health and your motivation to stick to it.
1. More Stable Energy Throughout the Day
Improved gut health leads to more stable energy because a balanced gut microbiome efficiently breaks down foods, and absorbs vital nutrients. Also, a healthy gut helps regulate blood sugar levels.
A balanced digestion is essential for smoother workflows and workouts.
2. Better Mood and Mental Clarity
For many years, the gut and brain were seen as two separate entities. This has made us focus on digestion on one hand, and emotions on the other.
Today, we know the gut-brain axis is the deep connection between our brain and emotion. This intricate relationship supports the regulation of our emotions, cognition, mental health disorders, and even makes physical tasks feel lighter.
3. Improved Sleep, Recovery, and Stress Resilience
According to reports by the National Institute of Health (NIH), balancing your gut microbiota can significantly improve your sleep quality and support physical recovery. Besides, a balanced gut enhances your general resilience to stress.
Gut microbes support the production of vital neurotransmitters and their precursors. They include Gamma-Aminobutyric Acid (GABA), which regulates mood and the sleep-wake cycle, and serotonin, a sleep enhancer.
When your gut is healthy, it optimizes the production of these hormones, supporting quality sleep.
Also, gut reset buffers the body from negative psychological effects of stress, enhancing emotional resilience.
Practical Steps: How to Support Your Gut During a Reset
So, you feel sluggish, bloated, and low on energy, and you’ve decided it's time to reset. How do you support your gut during this critical period? The following steps will help:
1. Consistency Matters More Than Perfection
Being consistent when timing supplements with meals offers a natural buffer against stomach upset while supporting absorption. Over time, this consistency reinforces the gut-motivation connection by helping your body maintain steady energy, digestion, and follow-through.
Optimize the daily timing of supplements, eating patterns, and hydration for enhanced digestion, microbiome balance, and nutrient absorption. Just check the best time to take supplements, probiotics, and multivitamins to ensure you develop a consistent habit of taking them.
When you time your supplements strategically, you maximize their effectiveness and minimize their side effects. For instance, taking probiotics early in the morning before eating anything else allows them to reach the gut fast and colonize more effectively because they won’t have to compete with food during digestion.
2. Pair Supplements with Foundational Habits
Foundational habits address the root causes of imbalance and provide a sustainable framework for long-term health.
When you pair them with supplements, they create a synergistic effect where foundational changes build an optimal environment for the supplements to function effectively.
During a reset, it is crucial to have adequate, quality sleep as it regulates bodily processes, including gut health. Besides, sleep stabilization allows your body to rest, repair, and maintain a balanced microbiome.
Also, remember to hydrate properly during gut reset. Hydration during this period supports digestion, efficient nutrient absorption, and a healthy gut lining.
Dietary adjustment is vital during this period. Reduce processed foods and increase fiber intake from vegetables, fruits, and whole grains to feed the beneficial gut microbes and minimize inflammation.
3. What to Expect During the First 10 Days
People report different experiences during gut reset, but here are some of the things you might experience during the first 10 days.
🫗 Days 1-3: Normal Adaptation Responses
In the first three days, you can expect to experience some initial bloating, gas, and general digestive upsets. This is especially true if you’re taking a significant amount of fiber. This response is a sign that your bacteria are adjusting to their new diet.
The initial days also emphasize getting rid of potential irritants and increasing hydration to support digestion. By day 2 and 3, you might experience calmer digestion because you will have avoided common gut disruptors such as alcohol, processed foods, and excess sugar.
🎯 Days 4-10: Improvement and Positive Changes
During this period, you can expect to experience increased energy, enhanced mood, reduced cravings, and better sleep. Your digestion will improve. Your body will absorb nutrients more efficiently, boosting your energy levels.
Besides, as your gut health improves, you’re likely to feel a lift in your overall mood. You will also have fewer cravings for junk food and sugar, resulting in more stable energy throughout the day.
Your Foundation Got You Started, Your Gut Keeps You Going
Think of your body as a house: in the first article, you rebuilt the foundation by supporting sleep rhythms, nutritional gaps, daily routines, and your overall baseline. Now you are reinforcing the internal structure—the gut, detox pathways, and the gut–brain connection—so the entire “house” remains strong no matter what life brings. This is where gut and motivation begin to work together to support consistency and momentum.
When foundational health and gut support are in place together, your habits finally have the biological stability they need to stick. There’s no forcing, no constant restarting, and no burnout. Just steady, sustainable momentum.
Your next chapter begins with strengthening your gut and nourishing your internal ecosystem so your habits feel natural, energizing, and long-lasting.
Ready to reset your gut and reclaim your health? Explore the Gut Health Bundle and the Clear Change Detox Program.
Best for full-body reset, clearer energy, and reduced inflammation.
Best for targeted gut support, less bloating, and microbiome balance.
About the Author
Dr. Malisa Carullo, ND is a naturopathic doctor and serves as Senior Manager of Medical Information and Safety at Metagenics, where she supports clinical education, product safety, and evidence-based practitioner guidance across North America.
She holds a Doctorate in Naturopathic Medicine and a Master of Science in Biology, with a focus on chronic disease care, healthy aging, and evidence-based approaches to long-term wellness. Dr. Carullo is dedicated to empowering both practitioners and patients through clear, research-informed education that bridges science and everyday health decisions.
Disclaimer: This blog is for educational purposes only and is not intended to diagnose, treat, cure, or prevent any condition. The information shared reflects clinical principles and general wellness guidance, not individualized medical advice. Every person’s health needs are unique, and responses to supplements or lifestyle changes can vary. Always consult a qualified healthcare practitioner before making changes to your diet, supplements, or health routine.
Gut Health and Energy FAQs
How Do I Know Whether I Need A Gut Reset or Detox?
Common signs that your gut may need support include persistent digestive discomfort, low energy, brain fog, mood fluctuations, food sensitivities, or frequent cravings. Bloating, gas, skin breakouts, and feeling “off” despite healthy habits are often signals that your digestive system needs attention.
If you’re unsure whether to start with a gut-focused reset or a broader detox, it can help to revisit the foundational steps first. You may want to review Resolution Ready: How to Build Healthy Habits That Actually Stick to ensure sleep, nutrients, and routines are in place, then explore targeted support within our Gut & Digestive Health Supplements to address what your body is signaling next.
Can I Take Probiotics During a Detox?
Yes, probiotics can be taken during a detox, and they often play an important role in supporting digestive balance. During a detox phase, certain protocols help clear unwanted byproducts, while probiotics help restore beneficial bacteria and support gut–brain communication.
Timing and formulation matter. Some people benefit from clearing first and reseeding afterward, while others tolerate gentle probiotic support throughout. Exploring different probiotic options can help you choose the right fit for your tolerance level and goals.
Can Gut Health Influence Motivation?
Yes. Gut health plays a direct role in motivation (a.k.a “the gut motivation connection”) because gut microbes influence neurotransmitters like dopamine and serotonin, which affect drive, mood, and emotional resilience. When the gut is imbalanced, motivation often drops even when you’re trying to “do everything right.
If low motivation is paired with stress, poor sleep, or emotional overwhelm, addressing the nervous system alongside gut health can be especially helpful.
You may benefit from reading What Chronic Stress Does to Daily Routines and How to Reset Your Nervous System, which explores how stress physiology and gut health intersect.
Do I Need to Change My Diet During the Gut Reset?
Yes. A gut reset works best when paired with dietary changes that reduce irritation and support beneficial bacteria. This typically includes reducing processed foods, sugar, alcohol, and artificial sweeteners, while increasing fiber-rich plants, fermented foods, and prebiotics.
You don’t need perfection. Small, consistent shifts in food quality and timing create an environment where supplements and probiotics can work more effectively. If you’re looking for structured guidance, pairing dietary changes with targeted gut supplements can simplify the process.
Does Gut Health Improve Energy?
Absolutely. A healthy gut improves how efficiently your body absorbs nutrients from food, which directly affects cellular energy production, recovery, and overall performance. When digestion is balanced, energy tends to feel steadier throughout the day rather than spiking and crashing.
If low energy persists, it can be helpful to support both digestion and foundational nutrients. Many people explore gut support alongside essential vitamins and minerals to address energy from multiple angles.
Can Poor Gut Health Cause Low Energy?
Yes. Poor gut health can lead to low energy due to nutrient malabsorption, chronic inflammation, and microbial imbalance. Research about the relationship between gut health and energy reveals that when digestion is impaired, the body may struggle to absorb key nutrients such as iron, B vitamins, and magnesium, all of which are essential for energy metabolism.
Supporting the gut can help restore proper absorption, while addressing nutrient gaps can further support sustained energy and resilience.
Visit our Gut & Digestive Health supplements page to find the best probiotic for you. For a 2-supplements-in-1 solution, explore UltraFlora Probiotic + Multivitamin.
What Emotions Are In Your Gut?
The gut is often called the “second brain” because it communicates constantly with the central nervous system. Gut activity influences emotions such as anxiety, calm, fear, and joy through neurotransmitters and immune signaling pathways.
When digestion is irritated or imbalanced, these signals can amplify stress responses and mood changes. Supporting gut health alongside stress, sleep, and mood can help restore emotional steadiness.
How Do You Reset Your Gut?
Resetting your gut requires a multifaceted approach that includes diet, lifestyle habits, and targeted support. This typically involves increasing fiber-rich foods, incorporating probiotics and prebiotics, staying hydrated, managing stress, prioritizing sleep, and reducing common gut disruptors like sugar and alcohol.
Many people benefit from following a structured program rather than trying to piece everything together on their own. Exploring gut-focused products can help you build a reset plan that feels clear and manageable.
References
- St-Onge MP, et al. Sleep duration and quality: impact on lifestyle behaviors. Obesity. 2016;24(2):282-289.
- Irwin MR. Sleep and inflammation: partners in sickness and health. Nat Rev Immunol. 2019;19(11):702-715.
- Jacka FN, et al. A randomised controlled trial of dietary improvement for adults with major depression. BMC Med. 2017;15:23.
- Volkow ND, et al. Motivation deficit in obesity: neural underpinnings. Lancet. 2011;378(9793):1466-1476.
- Calder PC. Nutrition, immunity and COVID-19. BMJ Nutr Prev Health. 2020;3(1):74-92.
- Bischoff SC, et al. Intestinal permeability and functional GI disorders. Gastroenterology. 2014;146(6):1606-1616.
- Fasano A. Leaky gut and autoimmune disease. Clin Rev Allergy Immunol. 2012;42(1):71-78.
- Camilleri M. Leaky gut: mechanisms, measurement and clinical implications. Gut. 2019;68(8):1516-1526.
- Cryan JF, Dinan TG. Mind-altering microorganisms. Nat Rev Neurosci. 2012;13(10):701-712.
- Mayer EA, et al. Gut–brain axis. J Neurosci. 2014;34(46):15490-15496.
- Kelly JR, et al. Gut microbiome and mental health. Psychiatr Res. 2016;245:20-32.
- Alcock J, et al. Is eating behavior manipulated by the gut microbiota? Bioessays. 2014;36(10):940-949.
- Torres-Fuentes C, et al. Psychobiotics and appetite regulation. Nutrients. 2017;9(6):553.
- Turnbaugh PJ, et al. The microbiome and energy balance. Nature. 2006;444(7122):1027-1031.
- Tilg H, et al. The gut-liver axis in health and disease. Nat Rev Gastroenterol Hepatol. 2016;13(9):567-581.
- Bajaj JS. The role of gut microbiota in liver disease. Am J Gastroenterol. 2019;114(8):1166-1174.
- Dinan TG, Cryan JF. Gut instincts: microbiota as a key regulator of brain and behavior. Nat Rev Neurosci. 2017;18(10):607-620.
- Woting A, Blaut M. The intestinal microbiota in metabolic disease. Nutrients. 2016;8(4):202.
- Rinninella E, et al. Gut microbiota, obesity, and metabolic health. Nutrients. 2019;11(2):347.
- Sonnenburg JL, Sonnenburg ED. Vulnerability of the industrialized microbiota. Cell Metab. 2019;29(1):6-8.
- Jones DP. Redefining oxidative stress. Antioxid Redox Signal. 2006;8(9-10):1865-1879.
- Lu SC. Regulation of glutathione synthesis. Mol Aspects Med. 2009;30(1-2):42-59.
- Tillhon M, et al. Berberine: new perspectives for old remedies. Biochem Pharmacol. 2012;84(10):1260-1267.
- Sun D, et al. Berberine and gut microbiota modulation. Front Pharmacol. 2018;9:325.
- Habtemariam S. Berberine pharmacology. Phytother Res. 2020;34(9):2145-2162.
- Sanders ME, et al. Probiotics and prebiotics in intestinal health. Gastroenterology. 2019;156(1):19-31.
- Wallace CJK, et al. Human gut microbiota and mental health. Nat Rev Gastroenterol Hepatol. 2020;17(6):343-359.